Senior Bioinformatics Engineer

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Requirements:

• MS or PhD in bioinformatics, computer science, or equivalent.
• 3-8 years of relevant work experience in industry post-PhD or MS.
• Experience establishing efficient, reproducible pipelines for the analysis of biological data and other data types preferred.
• Familiarity with cloud platforms (e.g., AWS).
• Familiarity with ETL process and data integration techniques.
• Experience building no-code tools that make analytical results accessible to decision makers (e.g., automated reports or dashboards) preferred.
• Ability to write high-quality code both independently and as part of a team.
• Experience with at least one scripting language (e.g., Python) and at least one database language (e.g., SQL) required.
• Experience with workflow systems (e.g., Nextflow, WDL/CWL, Airflow, etc) and/or statistical languages (e.g., R), valued but not essential.

Responsibilities:

• Create efficient pipelines for the analysis of genetic, functional genomic, proteomic, and other molecular data types.
• Integrate scientific pipelines and their output with other structured and unstructured data, including implementation of automated reports and dashboards.
• Collaborate with scientists and software engineers to execute complex analyses, including integration of internally and externally developed tools.
• Manage inputs, intermediates, and results of complex pipelines, providing clear provenance and reproducibility for critical decisions.